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    » Inductive logic programming for gene regulation prediction
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    AIED
    2007
    Springer
    103views Artificial Intelligence» more  AIED 2007»
    Predicting Students' Performance with SimStudent: Learning Cognitive Skills from Observation
    13 years 11 months ago
    Predicting Students' Performance with SimStudent: Learning Cognitive Skills from Observation
    Download  www.cs.cmu.edu
    SimStudent is a machine-learning agent that learns cognitive skills by demonstration. SimStudent was originally built as a building block for Cognitive Tutor Authoring Tools to hel...
    Noboru Matsuda, William W. Cohen, Jonathan Sewall,...
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    BMCBI
    2010
    109views more  BMCBI 2010»
    Application of machine learning methods to histone methylation ChIP-Seq data reveals H4R3me2 globally represses gene expression
    13 years 5 months ago
    Application of machine learning methods to histone methylation ChIP-Seq data reveals H4R3me2 globally represses gene expression
    Download  www.biomedcentral.com
    Background: In the last decade, biochemical studies have revealed that epigenetic modifications including histone modifications, histone variants and DNA methylation form a comple...
    Xiaojiang Xu, Stephen Hoang, Marty W. Mayo, Stefan...
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    BMCBI
    2007
    182views more  BMCBI 2007»
    Identifying regulatory targets of cell cycle transcription factors using gene expression and ChIP-chip data
    13 years 5 months ago
    Identifying regulatory targets of cell cycle transcription factors using gene expression and ChIP-chip data
    Download  www.biomedcentral.com
    Background: ChIP-chip data, which indicate binding of transcription factors (TFs) to DNA regions in vivo, are widely used to reconstruct transcriptional regulatory networks. Howev...
    Wei-Sheng Wu, Wen-Hsiung Li, Bor-Sen Chen
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    BMCBI
    2007
    130views more  BMCBI 2007»
    Differential analysis for high density tiling microarray data
    13 years 5 months ago
    Differential analysis for high density tiling microarray data
    Download  www.biomedcentral.com
    Background: High density oligonucleotide tiling arrays are an effective and powerful platform for conducting unbiased genome-wide studies. The ab initio probe selection method emp...
    Srinka Ghosh, Heather A. Hirsch, Edward A. Sekinge...
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    NAR
    2011
    214views Computer Vision» more  NAR 2011»
    starBase: a database for exploring microRNA-mRNA interaction maps from Argonaute CLIP-Seq and Degradome-Seq data
    12 years 8 months ago
    starBase: a database for exploring microRNA-mRNA interaction maps from Argonaute CLIP-Seq and Degradome-Seq data
    Download  nar.oxfordjournals.org
    MicroRNAs (miRNAs) represent an important class of small non-coding RNAs (sRNAs) that regulate gene expression by targeting messenger RNAs. However, assigning miRNAs to their regu...
    Jian-Hua Yang, Jun-Hao Li, Peng Shao, Hui Zhou, Yu...
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