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» Information Analysis of DNA Sequences
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BMCBI
2010
155views more  BMCBI 2010»
13 years 5 months ago
BISMA - Fast and accurate bisulfite sequencing data analysis of individual clones from unique and repetitive sequences
Background: Bisulfite sequencing is a popular method to analyze DNA methylation patterns at high resolution. A region of interest is targeted by PCR and about 20-50 subcloned DNA ...
Christian Rohde, Yingying Zhang, Richard Reinhardt...
WOB
2004
13 years 6 months ago
Mutual Information Content of Homologous DNA Sequences
The necessary information to reproduce and keep an organism is codified in acid nucleic molecules. Deepening the knowledge about how the information is stored in these bio-sequence...
Luciana Pessoa, Helena Cristina da Gama Leit&atild...
BMCBI
2004
86views more  BMCBI 2004»
13 years 5 months ago
A computer simulation analysis of the accuracy of partial genome sequencing and restriction fragment analysis in estimating gene
Background: Determination of genetic relatedness among microorganisms provides information necessary for making inferences regarding phylogeny. However, there is little informatio...
Baozhen Qiao, Ronald M. Weigel
INFORMATICALT
2010
142views more  INFORMATICALT 2010»
13 years 3 months ago
Complexity Estimation of Genetic Sequences Using Information-Theoretic and Frequency Analysis Methods
The genetic information in cells is stored in DNA sequences, represented by a string of four letters, each corresponding to a definite type of nucleotides. Genomic DNA sequences a...
Robertas Damasevicius
BMCBI
2007
147views more  BMCBI 2007»
13 years 5 months ago
Comparative analysis of long DNA sequences by per element information content using different contexts
Background: Features of a DNA sequence can be found by compressing the sequence under a suitable model; good compression implies low information content. Good DNA compression mode...
Trevor I. Dix, David R. Powell, Lloyd Allison, Jul...