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CONSTRAINTS
2010
110views more  CONSTRAINTS 2010»
13 years 3 months ago
Solving subgraph isomorphism problems with constraint programming
The subgraph isomorphism problem consists in deciding if there exists a copy of a pattern graph in a target graph. We introduce in this paper a global constraint and an associated ...
Stéphane Zampelli, Yves Deville, Christine ...
BMCBI
2007
202views more  BMCBI 2007»
13 years 6 months ago
ProtNet: a tool for stochastic simulations of protein interaction networks dynamics
Background: Protein interactions support cell organization and mediate its response to any specific stimulus. Recent technological advances have produced large data-sets that aim ...
Massimo Bernaschi, Filippo Castiglione, Alessandra...
GECCO
2006
Springer
154views Optimization» more  GECCO 2006»
13 years 10 months ago
Emergent mating topologies in spatially structured genetic algorithms
The application of network analysis to emergent mating topologies in spatially structured genetic algorithms is presented in this preliminary study as a framework for inferring ev...
Joshua L. Payne, Margaret J. Eppstein
WEBI
2009
Springer
14 years 24 days ago
Revealing Hidden Community Structures and Identifying Bridges in Complex Networks: An Application to Analyzing Contents of Web P
The emergence of scale free and small world properties in real world complex networks has stimulated lots of activity in the field of network analysis. An example of such a netwo...
Faraz Zaidi, Arnaud Sallaberry, Guy Melanço...
BIBE
2005
IEEE
154views Bioinformatics» more  BIBE 2005»
13 years 12 months ago
Effective Pre-Processing Strategies for Functional Clustering of a Protein-Protein Interactions Network
In this article we present novel preprocessing techniques, based on topological measures of the network, to identify clusters of proteins from Protein-protein interaction (PPI) ne...
Duygu Ucar, Srinivasan Parthasarathy, Sitaram Asur...