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BMCBI
2004
144views more  BMCBI 2004»
13 years 5 months ago
PASBio: predicate-argument structures for event extraction in molecular biology
Background: The exploitation of information extraction (IE), a technology aiming to provide instances of structured representations from free-form text, has been rapidly growing w...
Tuangthong Wattarujeekrit, Parantu K. Shah, Nigel ...
BMCBI
2005
153views more  BMCBI 2005»
13 years 5 months ago
Learning Statistical Models for Annotating Proteins with Function Information using Biomedical Text
Background: The BioCreative text mining evaluation investigated the application of text mining methods to the task of automatically extracting information from text in biomedical ...
Soumya Ray, Mark Craven
ISMB
2000
13 years 6 months ago
A Pragmatic Information Extraction Strategy for Gathering Data on Genetic Interactions
We present in this paper a pragmatic strategy to perform information extraction from biologic texts. Since the emergence of the information extraction field, techniques have evolv...
Denys Proux, François Rechenmann, Laurent J...
BMCBI
2005
189views more  BMCBI 2005»
13 years 5 months ago
A sentence sliding window approach to extract protein annotations from biomedical articles
Background: Within the emerging field of text mining and statistical natural language processing (NLP) applied to biomedical articles, a broad variety of techniques have been deve...
Martin Krallinger, Maria Padron, Alfonso Valencia
BMCBI
2007
181views more  BMCBI 2007»
13 years 5 months ago
Genes2Networks: connecting lists of gene symbols using mammalian protein interactions databases
Background: In recent years, mammalian protein-protein interaction network databases have been developed. The interactions in these databases are either extracted manually from lo...
Seth I. Berger, Jeremy M. Posner, Avi Ma'ayan