10 search results - page 1 / 2 » MATLIGN: a motif clustering, comparison and matching tool |
BMCBI
2007
13 years 4 months ago
2007
Background: Sequence motifs representing transcription factor binding sites (TFBS) are commonly encoded as position frequency matrices (PFM) or degenerate consensus sequences (CS)...
IMSCCS
2006
IEEE
13 years 10 months ago
2006
IEEE
Background: As more and more genomes are sequenced, comparative genomics approaches provide a methodology for identifying conserved regulatory elements that may be involved in gen...
BMCBI
2011
12 years 8 months ago
2011
Background: In 2004, we presented a web resource for stimulating the search for novel RNAs, RNA-As-Graphs (RAG), which classified, catalogued, and predicted RNA secondary structur...
WABI
2001
Springer
13 years 9 months ago
2001
Springer
We describe algorithms for pattern matching and pattern learning in TOPS diagrams (formal descriptions of protein topologies). These problems can be reduced to checking for subgrap...
IMSCCS
2006
IEEE
13 years 10 months ago
2006
IEEE
Background: DNA Microarray technology is an innovative methodology in experimental molecular biology, which has produced huge amounts of valuable data in the profile of gene expre...