10 search results - page 1 / 2 » MPIPairwiseStatSig: parallel pairwise statistical significan... |
HPDC
2010
IEEE
13 years 5 months ago
2010
IEEE
Sequence comparison is considered as a cornerstone application in bioinformatics, which forms the basis of many other applications. In particular, pairwise sequence alignment is a...
CIKM
2008
Springer
13 years 6 months ago
2008
Springer
Background: Accurate estimation of statistical significance of a pairwise alignment is an important problem in sequence comparison. Recently, a comparative study of pairwise stati...
BIB
2006
13 years 4 months ago
2006
One of the major goals of computational sequence analysis is to find sequence similarities, which could serve as evidence of structural and functional conservation, as well as of ...
WABI
2009
Springer
13 years 11 months ago
2009
Springer
We present a novel dynamic programming framework that allows one to compute tight upper bounds for the p-values of gapped local alignments in pseudo–polynomial time. Our algorith...
ALMOB
2007
13 years 4 months ago
2007
Background: The optimal score for ungapped local alignments of infinitely long random sequences is known to follow a Gumbel extreme value distribution. Less is known about the imp...