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ENTCS
2010
97views more  ENTCS 2010»
13 years 2 months ago
A Framework for Modelling and Simulating Networks of Cells
Several complex biological phenomena are to be modelled in terms of a large and dynamic network of compartments, where the interplay between inter-compartment and intra-compartmen...
Sara Montagna, Mirko Viroli
GECON
2009
Springer
144views Business» more  GECON 2009»
13 years 10 months ago
A Framework for Analyzing the Economics of a Market for Grid Services
This paper provides a single broad model for the analysis of a range of issues underlying a market for Grid services. The demand and the supply sides of such a market are being tre...
Robin Mason, Costas Courcoubetis, Natalia Miliou
BMCBI
2005
114views more  BMCBI 2005»
13 years 5 months ago
A new decoding algorithm for hidden Markov models improves the prediction of the topology of all-beta membrane proteins
Background: Structure prediction of membrane proteins is still a challenging computational problem. Hidden Markov models (HMM) have been successfully applied to the problem of pre...
Piero Fariselli, Pier Luigi Martelli, Rita Casadio
NC
2010
150views Neural Networks» more  NC 2010»
13 years 3 months ago
Deterministic and stochastic P systems for modelling cellular processes
This paper presents two approaches based on metabolic and stochastic P systems, together with their associated analysis methods, for modelling biological systems and illustrates th...
Marian Gheorghe, Vincenzo Manca, Francisco Jos&eac...
BIOCOMP
2006
13 years 6 months ago
Membrane Remodeling and Diffusion of Cytochrome C from a Geometrically Idealized Mitochondrial Crista
In healthy eukaryotic cells, mitochondria have an outer membrane that surrounds a complex inner membrane structure [7,8]. Cytochrome c is found in the space between the two membra...
John Manor, Peter Salamon, James Nulton, Joseph Ma...