13 search results - page 1 / 3 » Memory efficient folding algorithms for circular RNA seconda... |
BIOINFORMATICS
2006
13 years 5 months ago
2006
A small class of RNA molecules, in particular the tiny genomes of viroids, are circular. Yet most structure prediction algorithms handle only linear RNAs. The most straightforward ...
BMCBI
2005
13 years 4 months ago
2005
Background: Alignment of RNA secondary structures is important in studying functional RNA motifs. In recent years, much progress has been made in RNA motif finding and structure a...
GCB
2010
Springer
13 years 2 months ago
2010
Springer
Abstract: The search for local RNA secondary structures and the annotation of unusually stable folding regions in genomic sequences are two well motivated bioinformatic problems. I...
BMCBI
2008
13 years 5 months ago
2008
Background: With the rapid emergence of RNA databases and newly identified non-coding RNAs, an efficient compression algorithm for RNA sequence and structural information is neede...
APBC
2004
13 years 6 months ago
2004
Pseudoknots are widely occurring structural motifs in RNA. Pseudoknots have been shown to be functionally important in different RNAs which play regulatory, catalytic, or structur...