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» Metabolic Network Expansion with Answer Set Programming
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ICLP
2009
Springer
14 years 6 months ago
Metabolic Network Expansion with Answer Set Programming
Abstract. We propose a qualitative approach to elaborating the biosynthetic capacities of metabolic networks. In fact, large-scale metabolic networks as well as measured datasets s...
Torsten Schaub, Sven Thiele
CISIS
2010
IEEE
14 years 13 days ago
Logic-Based Steady-State Analysis and Revision of Metabolic Networks with Inhibition
—This paper presents a qualitative logic-based method for the steady-state analysis and revision of metabolic networks with inhibition. The approach is able to automatically revi...
Oliver Ray, Ken E. Whelan, Ross D. King
LPNMR
2005
Springer
13 years 11 months ago
Data Integration and Answer Set Programming
Abstract. The rapid expansion of the Internet and World Wide Web led to growing interest in data and information integration, which should be capable to deal with inconsistent and ...
Thomas Eiter
IJDMB
2011
129views more  IJDMB 2011»
12 years 9 months ago
Modelling gene and protein regulatory networks with Answer Set Programming
: Recently, many approaches to model regulatory networks have been proposed in the systems biology domain, however the task is far from being solved. In this paper we propose an an...
Timur Fayruzov, Jeroen Janssen, Dirk Vermeir, Chri...
LPNMR
2009
Springer
13 years 10 months ago
PHYLO-ASP: Phylogenetic Systematics with Answer Set Programming
This note summarizes the use of Answer Set Programming to solve various computational problems to infer phylogenetic trees and phylogenetic networks, and discusses its applicabilit...
Esra Erdem