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» Methods and Statistics for Combining Motif Match Scores
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JCB
1998
84views more  JCB 1998»
13 years 4 months ago
Methods and Statistics for Combining Motif Match Scores
Position-speci c scoring matrices are useful for representing and searching for protein sequence motifs. A sequence family can often be described by a group of one or more motifs,...
Timothy L. Bailey, Michael Gribskov
BMCBI
2007
133views more  BMCBI 2007»
13 years 4 months ago
MATLIGN: a motif clustering, comparison and matching tool
Background: Sequence motifs representing transcription factor binding sites (TFBS) are commonly encoded as position frequency matrices (PFM) or degenerate consensus sequences (CS)...
Matti Kankainen, Ari Löytynoja
BMCBI
2010
108views more  BMCBI 2010»
13 years 4 months ago
An intuitionistic approach to scoring DNA sequences against transcription factor binding site motifs
Background: Transcription factors (TFs) control transcription by binding to specific regions of DNA called transcription factor binding sites (TFBSs). The identification of TFBSs ...
Fernando Garcia-Alcalde, Armando Blanco, Adrian J....
TIFS
2008
102views more  TIFS 2008»
13 years 4 months ago
Use of Identification Trial Statistics for the Combination of Biometric Matchers
Combination functions typically used in biometric identification systems consider as input parameters only those matching scores which are related to a single person in order to de...
Sergey Tulyakov, Venu Govindaraju
CIBCB
2006
IEEE
13 years 10 months ago
Motif Evaluation by Leave-one-out Scoring
Abstract— We propose a new method for collecting information on regulatory elements found by any motif discovery program. We suggest that combining the results of n leave-oneout ...
Audrey Girouard, Noah W. Smith, Donna K. Slonim