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» Metrics for GO based protein semantic similarity: a systemat...
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BICOB
2011
Springer
12 years 5 months ago
Similarity and Prioritization of Disease Proteins using Path Length Measure
Semantic similarity measures have been used successfully and extensively in the biomedical research with various applications. As the biomedical ontologies, which form the main gro...
Anurag Nagar, Hisham Al-Mubaid
BMCBI
2008
200views more  BMCBI 2008»
13 years 5 months ago
Defining functional distances over Gene Ontology
Background: A fundamental problem when trying to define the functional relationships between proteins is the difficulty in quantifying functional similarities, even when well-stru...
Angela del Pozo, Florencio Pazos, Alfonso Valencia
BMCBI
2007
140views more  BMCBI 2007»
13 years 5 months ago
Evaluation of high-throughput functional categorization of human disease genes
Background: Biological data that are well-organized by an ontology, such as Gene Ontology, enables high-throughput availability of the semantic web. It can also be used to facilit...
James L. Chen, Yang Liu, Lee T. Sam, Jianrong Li, ...
BMCBI
2011
12 years 9 months ago
Assessing the functional coherence of modules found in multiple-evidence networks from Arabidopsis
Background: Combining multiple evidence-types from different information sources has the potential to reveal new relationships in biological systems. The integrated information ca...
Artem Lysenko, Michael Defoin-Platel, Keywan Hassa...
ISEMANTICS
2010
13 years 7 months ago
Foundations of data interoperability on the web: a web science perspective
In this paper, when we use the term ontology, we are primarily referring to linked data in the form of RDF(S). The problem of ontology mapping has attracted considerable attention...
Hamid Haidarian Shahri