22 search results - page 4 / 5 » Motif Evaluation by Leave-one-out Scoring |
BMCBI
2006
13 years 5 months ago
2006
Background: Many DNA regulatory elements occur as multiple instances within a target promoter. Gibbs sampling programs for finding DNA regulatory elements de novo can be prohibiti...
RECOMB
1999
Springer
13 years 10 months ago
1999
Springer
An important goal in bioinformatics is determining the homology and function of proteins from their sequences. Pairwise sequence similarity algorithms are often employed for this ...
ENGL
2008
13 years 5 months ago
2008
In biological sequence research, the positional weight matrix (PWM) is often used to search for putative transcription factor binding sites. A set of experimentally verified oligon...
CIBCB
2005
IEEE
13 years 7 months ago
2005
IEEE
— We present an integrative method for clustering coregulated genes and elucidating their underlying regulatory mechanisms. We use multi-state partition functions and thermodynam...
BMCBI
2005
13 years 5 months ago
2005
Background: We present a complete re-implementation of the segment-based approach to multiple protein alignment that contains a number of improvements compared to the previous ver...