26 search results - page 1 / 6 » Multiple sequence alignment using a GLOCSA guided genetic al... |
GECCO
2008
Springer
13 years 6 months ago
2008
Springer
This paper introduces GLOCSA as a new scoring function to rate multiple sequence alignments. It is intended to be simple, considering the whole alignment at once and reflecting t...
GECCO
2004
Springer
13 years 10 months ago
2004
Springer
Aligning multiple DNA or protein sequences is a fundamental step in the analyses of phylogeny, homology and molecular structure. Heuristic algorithms are applied because optimal mu...
CP
2003
Springer
13 years 10 months ago
2003
Springer
Multiple sequence alignment is a central problem in Bioinformatics. A known integer programming approach is to apply branch-and-cut to exponentially large graph-theoretic models. T...
GECCO
2003
Springer
13 years 10 months ago
2003
Springer
In this paper we present an approach that evolves the consensus sequence [25] for multiple sequence alignment (MSA) with genetic algorithm (GA). We have developed an encoding schem...
GECCO
2006
Springer
13 years 8 months ago
2006
Springer
This paper proposes a hybrid genetic algorithm for multiple sequence alignment. The algorithm evolves guide sequences and aligns input sequences based on the guide sequences. It a...