26 search results - page 1 / 6 » Multiple sequence alignment using a GLOCSA guided genetic al... |
GECCO
2008
Springer
13 years 10 months ago
2008
Springer
This paper introduces GLOCSA as a new scoring function to rate multiple sequence alignments. It is intended to be simple, considering the whole alignment at once and reflecting t...
GECCO
2004
Springer
14 years 2 months ago
2004
Springer
Aligning multiple DNA or protein sequences is a fundamental step in the analyses of phylogeny, homology and molecular structure. Heuristic algorithms are applied because optimal mu...
CP
2003
Springer
14 years 2 months ago
2003
Springer
Multiple sequence alignment is a central problem in Bioinformatics. A known integer programming approach is to apply branch-and-cut to exponentially large graph-theoretic models. T...
GECCO
2003
Springer
14 years 2 months ago
2003
Springer
In this paper we present an approach that evolves the consensus sequence [25] for multiple sequence alignment (MSA) with genetic algorithm (GA). We have developed an encoding schem...
GECCO
2006
Springer
14 years 1 months ago
2006
Springer
This paper proposes a hybrid genetic algorithm for multiple sequence alignment. The algorithm evolves guide sequences and aligns input sequences based on the guide sequences. It a...