Sciweavers

95 search results - page 19 / 19
» Near-Optimal Block Alignments
Sort
View
LCPC
2000
Springer
13 years 9 months ago
Efficient Dynamic Local Enumeration for HPF
In translating HPF programs, a compiler has to generate local iteration and communication sets. Apart from local enumeration, local storage compression is an issue, because in HPF ...
Will Denissen, Henk J. Sips
BMCBI
2006
129views more  BMCBI 2006»
13 years 5 months ago
BIPAD: A web server for modeling bipartite sequence elements
Background: Many dimeric protein complexes bind cooperatively to families of bipartite nucleic acid sequence elements, which consist of pairs of conserved half-site sequences sepa...
Chengpeng Bi, Peter K. Rogan
BMCBI
2002
133views more  BMCBI 2002»
13 years 5 months ago
Identification and characterization of subfamily-specific signatures in a large protein superfamily by a hidden Markov model app
Background: Most profile and motif databases strive to classify protein sequences into a broad spectrum of protein families. The next step of such database studies should include ...
Kevin Truong, Mitsuhiko Ikura
BMCBI
2011
13 years 18 days ago
DoBo: Protein domain boundary prediction by integrating evolutionary signals and machine learning
Background: Accurate identification of protein domain boundaries is useful for protein structure determination and prediction. However, predicting protein domain boundaries from a...
Jesse Eickholt, Xin Deng, Jianlin Cheng
BMCBI
2006
118views more  BMCBI 2006»
13 years 5 months ago
Automatic generation of gene finders for eukaryotic species
Background: The number of sequenced eukaryotic genomes is rapidly increasing. This means that over time it will be hard to keep supplying customised gene finders for each genome. ...
Kasper Munch, Anders Krogh