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RECOMB
2006
Springer
14 years 5 months ago
A Parsimony Approach to Genome-Wide Ortholog Assignment
The assignment of orthologous genes between a pair of genomes is a fundamental and challenging problem in comparative genomics, since many computational methods for solving various...
Zheng Fu, Xin Chen, Vladimir Vacic, Peng Nan, Yang...
SIGMOD
2007
ACM
159views Database» more  SIGMOD 2007»
14 years 5 months ago
Boosting topic-based publish-subscribe systems with dynamic clustering
We consider in this paper a class of Publish-Subscribe (pub-sub) systems called topic-based systems, where users subscribe to topics and are notified on events that belong to thos...
Tova Milo, Tal Zur, Elad Verbin
CRV
2009
IEEE
115views Robotics» more  CRV 2009»
13 years 12 months ago
Learning Model Complexity in an Online Environment
In this paper we introduce the concept and method for adaptively tuning the model complexity in an online manner as more examples become available. Challenging classification pro...
Dan Levi, Shimon Ullman
BMCBI
2010
178views more  BMCBI 2010»
13 years 5 months ago
Selecting high-dimensional mixed graphical models using minimal AIC or BIC forests
Background: Chow and Liu showed that the maximum likelihood tree for multivariate discrete distributions may be found using a maximum weight spanning tree algorithm, for example K...
David Edwards, Gabriel C. G. de Abreu, Rodrigo Lab...
JCB
2007
146views more  JCB 2007»
13 years 5 months ago
MSOAR: A High-Throughput Ortholog Assignment System Based on Genome Rearrangement
The assignment of orthologous genes between a pair of genomes is a fundamental and challenging problem in comparative genomics, since many computational methods for solving variou...
Zheng Fu, Xin Chen, Vladimir Vacic, Peng Nan, Yang...