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RECOMB
2004
Springer
14 years 5 months ago
Mining protein family specific residue packing patterns from protein structure graphs
Finding recurring residue packing patterns, or spatial motifs, that characterize protein structural families is an important problem in bioinformatics. To this end, we apply a nov...
Jun Huan, Wei Wang 0010, Deepak Bandyopadhyay, Jac...
ICDM
2006
IEEE
166views Data Mining» more  ICDM 2006»
13 years 11 months ago
Mining Generalized Graph Patterns Based on User Examples
There has been a lot of recent interest in mining patterns from graphs. Often, the exact structure of the patterns of interest is not known. This happens, for example, when molecu...
Pavel Dmitriev, Carl Lagoze
KDD
2009
ACM
132views Data Mining» more  KDD 2009»
14 years 6 months ago
Learning patterns in the dynamics of biological networks
Our dynamic graph-based relational mining approach has been developed to learn structural patterns in biological networks as they change over time. The analysis of dynamic network...
Chang Hun You, Lawrence B. Holder, Diane J. Cook
KDD
2007
ACM
148views Data Mining» more  KDD 2007»
14 years 5 months ago
Detecting research topics via the correlation between graphs and texts
In this paper we address the problem of detecting topics in large-scale linked document collections. Recently, topic detection has become a very active area of research due to its...
Yookyung Jo, Carl Lagoze, C. Lee Giles
KDD
2003
ACM
152views Data Mining» more  KDD 2003»
14 years 5 months ago
Interactive exploration of coherent patterns in time-series gene expression data
Discovering coherent gene expression patterns in time-series gene expression data is an important task in bioinformatics research and biomedical applications. In this paper, we pr...
Daxin Jiang, Jian Pei, Aidong Zhang