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» On Approximating an Implicit Cover Problem in Biology
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IPCO
2007
108views Optimization» more  IPCO 2007»
13 years 6 months ago
Robust Combinatorial Optimization with Exponential Scenarios
Following the well-studied two-stage optimization framework for stochastic optimization [15, 18], we study approximation algorithms for robust two-stage optimization problems with ...
Uriel Feige, Kamal Jain, Mohammad Mahdian, Vahab S...
APPROX
2008
Springer
184views Algorithms» more  APPROX 2008»
13 years 7 months ago
Approximately Counting Embeddings into Random Graphs
Let H be a graph, and let CH(G) be the number of (subgraph isomorphic) copies of H contained in a graph G. We investigate the fundamental problem of estimating CH(G). Previous res...
Martin Fürer, Shiva Prasad Kasiviswanathan
APPROX
2004
Springer
136views Algorithms» more  APPROX 2004»
13 years 10 months ago
On the Crossing Spanning Tree Problem
Given an undirected n-node graph and a set C of m cuts, the minimum crossing tree is a spanning tree which minimizes the maximum crossing of any cut in C, where the crossing of a c...
Vittorio Bilò, Vineet Goyal, R. Ravi, Mohit...
RECOMB
2004
Springer
14 years 5 months ago
Perfect phylogeny and haplotype assignment
This paper is concerned with the reconstruction of perfect phylogenies from binary character data with missing values, and related problems of inferring complete haplotypes from h...
Eran Halperin, Richard M. Karp
IJBRA
2008
66views more  IJBRA 2008»
13 years 5 months ago
Integer programming-based approach to allocation of reporter genes for cell array analysis
Abstract Observing behaviors of protein pathways and genetic networks under various environments in living cells is essential for unraveling disease and developing drugs. For that ...
Morihiro Hayashida, Fuyan Sun, Sachiyo Aburatani, ...