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» On Performance of Compressed Pattern Matching on VF Codes
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BMCBI
2010
131views more  BMCBI 2010»
13 years 4 months ago
Prediction of epigenetically regulated genes in breast cancer cell lines
Background: Methylation of CpG islands within the DNA promoter regions is one mechanism that leads to aberrant gene expression in cancer. In particular, the abnormal methylation o...
Leandro A. Loss, Anguraj Sadanandam, Steffen Durin...
LOPSTR
1997
Springer
13 years 9 months ago
Development of Correct Transformation Schemata for Prolog Programs
Schema-based program transformation [8] has been proposed as an effective technique for the optimisation of logic programs. Schemata are applied to a logic program, mapping ineffi...
Julian Richardson, Norbert E. Fuchs
APBC
2004
108views Bioinformatics» more  APBC 2004»
13 years 6 months ago
Ladderlike Stepping and Interval Jumping Searching Algorithms for DNA Sequences
In this study we have designed a novel algorithm for searching common segments in multiple DNA sequences. To improve efficiency in pattern searching, combination of hashing encodi...
Tun-Wen Pai, Margaret Dah-Tsyr Chang, Jia-Han Chu,...
CIKM
2008
Springer
13 years 6 months ago
TinyLex: static n-gram index pruning with perfect recall
Inverted indexes using sequences of characters (n-grams) as terms provide an error-resilient and language-independent way to query for arbitrary substrings and perform approximate...
Derrick Coetzee
JIPS
2007
223views more  JIPS 2007»
13 years 4 months ago
Addressing Mobile Agent Security through Agent Collaboration
: The use of agent paradigm in today’s applications is hampered by the security concerns of agents and hosts alike. The agents require the presence of a secure and trusted execut...
Evens Jean, Yu Jiao, Ali R. Hurson