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» On Sorting Permutations by Double-Cut-and-Joins
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CORR
2004
Springer
168views Education» more  CORR 2004»
13 years 4 months ago
Estimating Genome Reversal Distance by Genetic Algorithm
Sorting by reversals is an important problem in inferring the evolutionary relationship between two genomes. The problem of sorting unsigned permutation has been proven to be NP-ha...
Andy Auyeung, Ajith Abraham
WABI
2005
Springer
132views Bioinformatics» more  WABI 2005»
13 years 10 months ago
Perfect Sorting by Reversals Is Not Always Difficult
—We propose new algorithms for computing pairwise rearrangement scenarios that conserve the combinatorial structure of genomes. More precisely, we investigate the problem of sort...
Sèverine Bérard, Anne Bergeron, Cedr...
ICCD
2002
IEEE
128views Hardware» more  ICCD 2002»
14 years 1 months ago
Subword Sorting with Versatile Permutation Instructions
Subword parallelism has succeeded in accelerating many multimedia applications. Subword permutation instructions have been proposed to efficiently rearrange subwords in or among r...
Zhijie Shi, Ruby B. Lee
RSA
2002
161views more  RSA 2002»
13 years 4 months ago
Asymptotic analysis of (3, 2, 1)-shell sort
: We analyze the (3, 2, 1)-Shell Sort algorithm under the usual random permutation model.
Robert T. Smythe, J. A. Wellner
DM
2007
119views more  DM 2007»
13 years 4 months ago
Short proofs for cut-and-paste sorting of permutations
We consider the problem of determining the maximum number of moves required to sort a permutation of [n] using cut-and-paste operations, in which a segment is cut out and then pas...
Daniel W. Cranston, Ivan Hal Sudborough, Douglas B...