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» On the Approximability of Comparing Genomes with Duplicates
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GECCO
2007
Springer
256views Optimization» more  GECCO 2007»
13 years 11 months ago
A particle swarm optimization approach for estimating parameter confidence regions
Point estimates of the parameters in real world models convey valuable information about the actual system. However, parameter comparisons and/or statistical inference requires de...
Praveen Koduru, Stephen Welch, Sanjoy Das
EUROSYS
2006
ACM
14 years 2 months ago
Ferret: a toolkit for content-based similarity search of feature-rich data
Building content-based search tools for feature-rich data has been a challenging problem because feature-rich data such as audio recordings, digital images, and sensor data are in...
Qin Lv, William Josephson, Zhe Wang, Moses Charika...
BMCBI
2006
94views more  BMCBI 2006»
13 years 5 months ago
Metabolite coupling in genome-scale metabolic networks
Background: Biochemically detailed stoichiometric matrices have now been reconstructed for various bacteria, yeast, and for the human cardiac mitochondrion based on genomic and pr...
Scott A. Becker, Nathan D. Price, Bernhard O. Pals...
WABI
2010
Springer
167views Bioinformatics» more  WABI 2010»
13 years 3 months ago
Quantifying the Strength of Natural Selection of a Motif Sequence
Quantification of selective pressures on regulatory sequences is a central question in studying the evolution of gene regulatory networks. Previous methods focus primarily on sing...
Chen-Hsiang Yeang