This paper demonstrates that several known sequence kernels can be expressed in a unified framework in which the position specificity is modeled by fuzzy equivalence relations. In ...
Ulrich Bodenhofer, Karin Schwarzbauer, Mihaela Ion...
Compressed bitmap indexes are increasingly used for efficiently querying very large and complex databases. The Word Aligned Hybrid (WAH) bitmap compression scheme is commonly rec...
Current biological sequence comparison tools frequently fail to recognize matches between homologs when sequence similarity is below the twilight zone of less than 25% sequence id...
The positional rigidity of graphemes (as well as words considered as single units) in written sequences has been analyzed in this paper using complex network methodology. In partic...