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BMCBI
2004
150views more  BMCBI 2004»
13 years 4 months ago
SS-Wrapper: a package of wrapper applications for similarity searches on Linux clusters
Background: Large-scale sequence comparison is a powerful tool for biological inference in modern molecular biology. Comparing new sequences to those in annotated databases is a u...
Chunlin Wang, Elliot J. Lefkowitz
SIAMCOMP
1998
117views more  SIAMCOMP 1998»
13 years 4 months ago
The Queue-Read Queue-Write PRAM Model: Accounting for Contention in Parallel Algorithms
This paper introduces the queue-read, queue-write (qrqw) parallel random access machine (pram) model, which permits concurrent reading and writing to shared memory locations, but ...
Phillip B. Gibbons, Yossi Matias, Vijaya Ramachand...
ASPDAC
2010
ACM
120views Hardware» more  ASPDAC 2010»
13 years 2 months ago
Wideband reduced modeling of interconnect circuits by adaptive complex-valued sampling method
In this paper, we propose a new wideband model order reduction method for interconnect circuits by using a novel adaptive sampling and error estimation scheme. We try to address t...
Hai Wang, Sheldon X.-D. Tan, Gengsheng Chen
VLDB
2007
ACM
145views Database» more  VLDB 2007»
14 years 5 months ago
Executing Stream Joins on the Cell Processor
Low-latency and high-throughput processing are key requirements of data stream management systems (DSMSs). Hence, multi-core processors that provide high aggregate processing capa...
Bugra Gedik, Philip S. Yu, Rajesh Bordawekar
WILF
2007
Springer
170views Fuzzy Logic» more  WILF 2007»
13 years 11 months ago
Time-Series Alignment by Non-negative Multiple Generalized Canonical Correlation Analysis
Background: Quantitative analysis of differential protein expressions requires to align temporal elution measurements from liquid chromatography coupled to mass spectrometry (LC/M...
Bernd Fischer, Volker Roth, Joachim M. Buhmann