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» On the Structure of Syntenic Distance
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CIBCB
2007
IEEE
13 years 11 months ago
An Experimental Evaluation of Inversion-and Transposition-Based Genomic Distances through Simulations
— Rearrangements of genes and other syntenic blocks have become a topic of intensive study by phylogenists, comparative genomicists, and computational biologists: they are a feat...
Moulik Kothari, Bernard M. E. Moret
JCB
2002
111views more  JCB 2002»
13 years 5 months ago
A General Edit Distance between RNA Structures
Arc-annotated sequences are useful in representing the structural information of RNA sequences. In general, RNA secondary and tertiary structures can be represented as a set of ne...
Tao Jiang, Guohui Lin, Bin Ma, Kaizhong Zhang
DIS
2010
Springer
13 years 3 months ago
Adapted Transfer of Distance Measures for Quantitative Structure-Activity Relationships
Quantitative structure-activity relationships (QSARs) are regression models relating chemical structure to biological activity. Such models allow to make predictions for toxicologi...
Ulrich Rückert, Tobias Girschick, Fabian Buch...
IPL
2002
74views more  IPL 2002»
13 years 5 months ago
Restricted rotation distance between binary trees
Restricted rotation distance between pairs of rooted binary trees measures differences in tree shape and is related to rotation distance. In restricted rotation distance, the rota...
Sean Cleary
KAIS
2000
87views more  KAIS 2000»
13 years 5 months ago
An Index Structure for Data Mining and Clustering
Abstract. In this paper we present an index structure, called MetricMap, that takes a set of objects and a distance metric and then maps those objects to a k-dimensional space in s...
Xiong Wang, Jason Tsong-Li Wang, King-Ip Lin, Denn...