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COMPLEXITY
2010
173views more  COMPLEXITY 2010»
13 years 8 days ago
Signal-regulated systems and networks
The paper presents the use of signal regulatory networks, a biologically-inspired model based on gene regulatory networks. Signal regulatory networks are a way of understanding a ...
Terence L. van Zyl, Elizabeth Marie Ehlers
HISB
2011
99views more  HISB 2011»
12 years 5 months ago
Quantitative Modeling the Saccharomyces cerevisiae FLR1 Regulatory Network Using an S-System Formalism
—We address the problem of finding a mathematical model for the genetic network regulating the stress response of the yeast Saccharomyces cerevisiae to the fungicide mancozeb. A...
Dulce Calçada, Susana Vinga, Ana T. Freitas...
BMCBI
2010
172views more  BMCBI 2010»
13 years 9 days ago
Nonparametric identification of regulatory interactions from spatial and temporal gene expression data
Background: The correlation between the expression levels of transcription factors and their target genes can be used to infer interactions within animal regulatory networks, but ...
Anil Aswani, Soile V. E. Keränen, James Brown...
HYBRID
2007
Springer
13 years 11 months ago
Model Checking Genetic Regulatory Networks with Parameter Uncertainty
The lack of precise numerical information for the values of biological parameters severely limits the development and analysis of models of genetic regulatory networks. To deal wit...
Grégory Batt, Calin Belta, Ron Weiss
CMSB
2007
Springer
13 years 11 months ago
Context Sensitivity in Logical Modeling with Time Delays
For modeling and analyzing regulatory networks based on qualitative information and possibly additional temporal constraints, approaches using hybrid automata can be very helpful. ...
Heike Siebert, Alexander Bockmayr