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CODES
2008
IEEE
13 years 11 months ago
Static analysis of processor stall cycle aggregation
Processor Idle Cycle Aggregation (PICA) is a promising approach for low power execution of processors, in which small memory stalls are aggregated to create a large one, and the p...
Jongeun Lee, Aviral Shrivastava
ECCC
2006
88views more  ECCC 2006»
13 years 5 months ago
Hardness of Directed Routing with Congestion
Given a graph G and a collection of source-sink pairs in G, what is the least integer c such that each source can be connected by a path to its sink, with at most c paths going th...
Julia Chuzhoy, Sanjeev Khanna
BMCBI
2010
100views more  BMCBI 2010»
13 years 5 months ago
Scaffold filling, contig fusion and comparative gene order inference
Background: There has been a trend in increasing the phylogenetic scope of genome sequencing without finishing the sequence of the genome. Increasing numbers of genomes are being ...
Adriana Muñoz, Chunfang Zheng, Qian Zhu, Vi...
AE
2005
Springer
13 years 10 months ago
Evolutionary Design of a DDPD Model of Ligation
Ligation is a form of chemical self-assembly that involves dynamic formation of strong covalent bonds in the presence of weak associative forces. We study an extremely simple form ...
Mark A. Bedau, Andrew Buchanan, Gianluca Gazzola, ...
BMCBI
2006
113views more  BMCBI 2006»
13 years 5 months ago
GibbsST: a Gibbs sampling method for motif discovery with enhanced resistance to local optima
Background: Computational discovery of transcription factor binding sites (TFBS) is a challenging but important problem of bioinformatics. In this study, improvement of a Gibbs sa...
Kazuhito Shida