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» PIR-ALN: a database of protein sequence alignments
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DEXA
2007
Springer
150views Database» more  DEXA 2007»
13 years 12 months ago
Sequence Alignment as a Database Technology Challenge
Abstract. Sequence alignment is an important task for molecular biologists. Because alignment basically deals with approximate string matching on large biological sequence collecti...
Hans Philippi
NAR
1998
122views more  NAR 1998»
13 years 5 months ago
The PIR-International Protein Sequence Database
The Protein Information Resource (PIR; http://wwwnbrf.georgetown.edu/pir/ ) supports research on molecular evolution, functional genomics, and computational biology by maintaining...
Winona C. Barker, John S. Garavelli, Daniel H. Haf...
BIBE
2007
IEEE
152views Bioinformatics» more  BIBE 2007»
13 years 6 months ago
SBLAST: Structural Basic Local Alignment Searching Tools using Geometric Hashing
While much research has been done on finding similarities between protein sequences, there has not been the same progress on finding similarities between protein structures. Here ...
Tom Milledge, Gaolin Zheng, Tim Mullins, Giri Nara...
BIOINFORMATICS
1999
74views more  BIOINFORMATICS 1999»
13 years 5 months ago
PIR-ALN: a database of protein sequence alignments
Geetha Y. Srinivasarao, Lai-Su L. Yeh, Christopher...
NAR
1998
86views more  NAR 1998»
13 years 5 months ago
Pfam: multiple sequence alignments and HMM-profiles of protein domains
Pfam contains multiple alignments and hidden Markov model based profiles (HMM-profiles) of complete protein domains. The definition of domain boundaries, family members and alignm...
Erik L. L. Sonnhammer, Sean R. Eddy, Ewan Birney, ...