127 search results - page 1 / 26 » Parallel Assembler for Fuzzy Genome Sequence Assembly |
CAINE
2008
13 years 6 months ago
2008
Assembly is an NP-Hard problem, which involves comparing fragments that have a time complexity of O(n2 ). This paper presents a parallel approach for sequence assembly. The parall...
CIBCB
2007
IEEE
13 years 11 months ago
2007
IEEE
—DNA matching is a crucial step in sequence alignment. Since sequence alignment is an approximate matching process there is a need for good approximate algorithms. The process of...
BMCBI
2007
13 years 4 months ago
2007
Background: Genome assemblers have grown very large and complex in response to the need for algorithms to handle the challenges of large whole-genome sequencing projects. Many of ...
SC
2009
ACM
13 years 11 months ago
2009
ACM
Bioinformatics researchers need efficient means to process large collections of sequence data. One application of interest, genome assembly, has great potential for parallelizati...
BICOB
2009
Springer
13 years 11 months ago
2009
Springer
The de novo assembly of genomes from high-throughput short reads is an active area of research. Several promising methods have been recently developed, with applicability mainly re...