This paper presents a parallel version of CLUSTAL W, called pCLUSTAL. In contrast to the commercial SGI parallel Clustal, which requires an expensive shared memory SGI multiprocess...
James Cheetham, Frank K. H. A. Dehne, Sylvain Pitr...
ClustalW is the most widely used tool for aligning multiple protein or nucleotide sequences. The alignment is achieved via three stages: pairwise alignment, guide tree generation ...
K. Chaichoompu, Surin Kittitornkun, Sissades Tongs...
Background: There is an increasing demand to assemble and align large-scale biological sequence data sets. The commonly used multiple sequence alignment programs are still limited...
Abstract—We first present a problem called precedence constrained two traveling salesman (PC2TSP). We propose a nearoptimal heuristic to PC2TSP to generate tours by clustering p...