Sciweavers

132 search results - page 1 / 27
» Parallel Extreme Pathway Computation for Metabolic Networks
Sort
View
IPPS
2002
IEEE
13 years 9 months ago
Parallel Out-of-Core Algorithm for Genome-Scale Enumeration of Metabolic Systemic Pathways
Systemic pathways-oriented approaches to analysis of metabolic networks are effective for small networks but are computationally infeasible for genome scale networks. Current comp...
Nagiza F. Samatova, Al Geist, George Ostrouchov, A...
BMCBI
2007
77views more  BMCBI 2007»
13 years 4 months ago
Estimation of the number of extreme pathways for metabolic networks
Matthew Yeung, Ines Thiele, Bernhard O. Palsson
CSB
2005
IEEE
129views Bioinformatics» more  CSB 2005»
13 years 10 months ago
A Pivoting Algorithm for Metabolic Networks in the Presence of Thermodynamic Constraints
A linear programming algorithm is presented to constructively compute thermodynamically feasible fluxes and change in chemical potentials of reactions for a metabolic network. It...
R. Nigam, S. Liang
BMCBI
2004
154views more  BMCBI 2004»
13 years 4 months ago
Computation of elementary modes: a unifying framework and the new binary approach
Background: Metabolic pathway analysis has been recognized as a central approach to the structural analysis of metabolic networks. The concept of elementary (flux) modes provides ...
Julien Gagneur, Steffen Klamt