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» Parallel algorithms for mining frequent structural motifs in...
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SDM
2010
SIAM
202views Data Mining» more  SDM 2010»
13 years 3 months ago
Multiresolution Motif Discovery in Time Series
Time series motif discovery is an important problem with applications in a variety of areas that range from telecommunications to medicine. Several algorithms have been proposed t...
Nuno Castro, Paulo J. Azevedo
BMCBI
2006
95views more  BMCBI 2006»
13 years 4 months ago
A quantitative analysis of secondary RNA structure using domination based parameters on trees
Background: It has become increasingly apparent that a comprehensive database of RNA motifs is essential in order to achieve new goals in genomic and proteomic research. Secondary...
Teresa W. Haynes, Debra J. Knisley, Edith Seier, Y...
RECOMB
2004
Springer
14 years 5 months ago
Mining protein family specific residue packing patterns from protein structure graphs
Finding recurring residue packing patterns, or spatial motifs, that characterize protein structural families is an important problem in bioinformatics. To this end, we apply a nov...
Jun Huan, Wei Wang 0010, Deepak Bandyopadhyay, Jac...
VLDB
2005
ACM
180views Database» more  VLDB 2005»
13 years 10 months ago
Cache-conscious Frequent Pattern Mining on a Modern Processor
In this paper, we examine the performance of frequent pattern mining algorithms on a modern processor. A detailed performance study reveals that even the best frequent pattern min...
Amol Ghoting, Gregory Buehrer, Srinivasan Parthasa...