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WABI
2001
Springer
142views Bioinformatics» more  WABI 2001»
13 years 9 months ago
Pattern Matching and Pattern Discovery Algorithms for Protein Topologies
We describe algorithms for pattern matching and pattern learning in TOPS diagrams (formal descriptions of protein topologies). These problems can be reduced to checking for subgrap...
Juris Viksna, David Gilbert
KDD
2005
ACM
162views Data Mining» more  KDD 2005»
14 years 4 months ago
Discovering frequent topological structures from graph datasets
The problem of finding frequent patterns from graph-based datasets is an important one that finds applications in drug discovery, protein structure analysis, XML querying, and soc...
Ruoming Jin, Chao Wang, Dmitrii Polshakov, Sriniva...
DAGSTUHL
2006
13 years 6 months ago
Point-set algorithms for pattern discovery and pattern matching in music
An algorithm that discovers the themes, motives and other perceptually significant repeated patterns in a musical work can be used, for example, in a music information retrieval sy...
David Meredith
IBPRIA
2005
Springer
13 years 10 months ago
A New Algorithm for Pattern Optimization in Protein-Protein Interaction Extraction System
Abstract. In pattern matching based Protein-Protein Interaction Extraction systems, patterns generated manually or automatically exist erroneous and redundancy, which greatly affec...
Yu Hao, Xiaoyan Zhu, Ming Li
EDBT
2012
ACM
257views Database» more  EDBT 2012»
11 years 7 months ago
Indexing and mining topological patterns for drug discovery
Increased availability of large repositories of chemical compounds has created new challenges and opportunities for the application of data-mining and indexing techniques to probl...
Sayan Ranu, Ambuj K. Singh