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CORR
2012
Springer
176views Education» more  CORR 2012»
12 years 1 months ago
Capturing Topology in Graph Pattern Matching
Graph pattern matching is often defined in terms of subgraph isomorphism, an np-complete problem. To lower its complexity, various extensions of graph simulation have been consid...
Shuai Ma, Yang Cao, Wenfei Fan, Jinpeng Huai, Tian...
BMCBI
2008
141views more  BMCBI 2008»
13 years 5 months ago
Discovering functional interaction patterns in protein-protein interaction networks
Background: In recent years, a considerable amount of research effort has been directed to the analysis of biological networks with the availability of genome-scale networks of ge...
Mehmet E. Turanalp, Tolga Can
ATAL
2008
Springer
13 years 7 months ago
Discovering tactical behavior patterns supported by topological structures in soccer agent domains
Behaviors in soccer-agent domains can involve individual plays, several players involved in tactical plays or the whole team trying to follow strategies supported by specific form...
Fernando Ramos, Huberto Ayanegui
CSB
2003
IEEE
108views Bioinformatics» more  CSB 2003»
13 years 10 months ago
A Pattern Matching Algorithm for Codon Optimization and CpG Motif-Engineering in DNA Expression Vectors
Codon optimization enhances the efficiency of DNA expression vectors used in DNA vaccination and gene therapy by increasing protein expression. Additionally, certain nucleotide mo...
Ravi Vijaya Satya, Amar Mukherjee, Udaykumar Ranga
CBMS
2007
IEEE
13 years 11 months ago
MS2DB: A Mass-Based Hashing Algorithm for the Identification of Disulfide Linkage Patterns in Protein Utilizing Mass Spectrometr
The tertiary structure and biological function of a protein can be better understood given knowledge of the number and location of its disulfide bonds. By utilizing mass spectrome...
Timothy Lee, Rahul Singh, Ten-Yang Yen, Bruce Mach...