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» Predicting the beta-helix fold from protein sequence data
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BMCBI
2008
111views more  BMCBI 2008»
13 years 5 months ago
Protein contact order prediction from primary sequences
Background: Contact order is a topological descriptor that has been shown to be correlated with several interesting protein properties such as protein folding rates and protein tr...
Yi Shi, Jianjun Zhou, David Arndt, David S. Wishar...
CANDC
2006
ACM
13 years 5 months ago
Prediction of protein subcellular location using hydrophobic patterns of amino acid sequence
The function of eukaryotic protein is closely correlated with its subcellular location. The number of newly found protein sequences entering into data banks is rapidly increasing ...
Tongliang Zhang, Yongsheng Ding, Kuo-Chen Chou
BMCBI
2006
101views more  BMCBI 2006»
13 years 5 months ago
Local protein structure prediction using discriminative models
Background: In recent years protein structure prediction methods using local structure information have shown promising improvements. The quality of new fold predictions has risen...
Oliver Sander, Ingolf Sommer, Thomas Lengauer
CSB
2004
IEEE
177views Bioinformatics» more  CSB 2004»
13 years 9 months ago
High-Throughput 3D Structural Homology Detection via NMR Resonance Assignment
One goal of the structural genomics initiative is the identification of new protein folds. Sequence-based structural homology prediction methods are an important means for priorit...
Christopher James Langmead, Bruce Randall Donald
BMCBI
2008
178views more  BMCBI 2008»
13 years 5 months ago
A discriminative method for protein remote homology detection and fold recognition combining Top-n-grams and latent semantic ana
Background: Protein remote homology detection and fold recognition are central problems in bioinformatics. Currently, discriminative methods based on support vector machine (SVM) ...
Bin Liu, Xiaolong Wang, Lei Lin, Qiwen Dong, Xuan ...