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IPPS
2009
IEEE
12 years 8 months ago
Predictive analysis and optimisation of pipelined wavefront computations
Pipelined wavefront computations are a ubiquitous class of parallel algorithm used for the solution of a num­ ber of scientific and engineering applications. This paper investig...
Gihan R. Mudalige, Simon D. Hammond, J. A. Smith, ...
IPPS
2008
IEEE
12 years 8 months ago
A plug-and-play model for evaluating wavefront computations on parallel architectures
This paper develops a plug-and-play reusable LogGP model that can be used to predict the runtime and scaling behavior of different MPI-based pipelined wavefront applications runni...
Gihan R. Mudalige, Mary K. Vernon, Stephen A. Jarv...
RTS
2000
143views more  RTS 2000»
12 years 1 months ago
Fast and Precise WCET Prediction by Separated Cache and Path Analyses
Precise run-time prediction suffers from a complexity problem when doing an integrated analysis. This problem is characterised by the conflict between an optimal solution and the c...
Henrik Theiling, Christian Ferdinand, Reinhard Wil...
BIBE
2003
IEEE
133views Bioinformatics» more  BIBE 2003»
12 years 7 months ago
A Computational Pipeline for Protein Structure Prediction and Analysis at Genome Scale
The tertiary (3D) structure of a protein contains the essential information for understanding the biological function of the protein at the molecular and cellular levels. Traditio...
Manesh J. Shah, Sergei Passovets, Dongsup Kim, Kyl...
GECCO
2006
Springer
172views Optimization» more  GECCO 2006»
12 years 5 months ago
Multi-objective optimisation of the protein-ligand docking problem in drug discovery
The pharmaceutical industry is facing an ever-increasing demand to discover novel drugs that are more effective and safer than existing ones. The industry faces huge problem in im...
A. Oduguwa, A. Tiwari, S. Fiorentino, R. Roy
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