Abstract. To describe, analyze, and model the topological and structural characteristics of the Internet, researchers use Internet maps constructed at the router or autonomous syst...
The main goal of the motif finding problem is to detect novel, over-represented unknown signals in a set of sequences (e.g. transcription factor binding sites in a genome). The mo...
Chandan K. Reddy, Yao-Chung Weng, Hsiao-Dong Chian...
Abstract--A hybrid MPI/Pthreads parallelization was implemented in the RAxML phylogenetics code. New MPI code was added to the existing Pthreads production code to exploit parallel...
With billion-transistor chips on the horizon, single-chip multiprocessors (CMPs) are likely to become commodity components. Speculative CMPs use hardware to enforce dependence, al...
Troy A. Johnson, Rudolf Eigenmann, T. N. Vijaykuma...
When integrating software threads together to boost performance on a processor with instruction-level parallel processing support, it is rarely clear which code regions should be ...