50 search results - page 1 / 10 » Protein homology detection using string alignment kernels |
BIOINFORMATICS
2004
13 years 5 months ago
2004
CIBCB
2005
IEEE
13 years 11 months ago
2005
IEEE
— Part of the challenge of modeling protein sequences is their discrete nature. Many of the most powerful statistical and learning techniques are applicable to points in a Euclid...
ICPR
2008
IEEE
14 years 6 months ago
2008
IEEE
In this work we present a new string similarity feature, the sparse spatial sample (SSS). An SSS is a set of short substrings at specific spatial displacements contained in the or...
BIOINFORMATICS
2005
13 years 5 months ago
2005
Motivation: Remote homology detection between protein sequences is a central problem in computational biology. Supervised learning algorithms based on support vector machines are ...
BMCBI
2006
13 years 5 months ago
2006
Background: Detecting remote homologies by direct comparison of protein sequences remains a challenging task. We had previously developed a similarity score between sequences, cal...