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» Protein structure alignment by deterministic annealing
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BIOINFORMATICS
2005
41views more  BIOINFORMATICS 2005»
13 years 4 months ago
Protein structure alignment by deterministic annealing
Luonan Chen, Tianshou Zhou, Yun Tang
BMCBI
2010
122views more  BMCBI 2010»
13 years 5 months ago
Fast and accurate protein substructure searching with simulated annealing and GPUs
Background: Searching a database of protein structures for matches to a query structure, or occurrences of a structural motif, is an important task in structural biology and bioin...
Alex Stivala, Peter J. Stuckey, Anthony Wirth
GECCO
2004
Springer
137views Optimization» more  GECCO 2004»
13 years 10 months ago
Evolving Better Multiple Sequence Alignments
Aligning multiple DNA or protein sequences is a fundamental step in the analyses of phylogeny, homology and molecular structure. Heuristic algorithms are applied because optimal mu...
Luke Sheneman, James A. Foster