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GCB
2006
Springer
99views Biometrics» more  GCB 2006»
13 years 8 months ago
Shape Distributions and Protein Similarity
: In this paper we describe a similarity model that provides the objective basis for clustering proteins of similar structure. More specifically, we consider the following variant ...
Stefan Canzar, Jan Remy
BMCBI
2006
114views more  BMCBI 2006»
13 years 5 months ago
PROMPT: a protein mapping and comparison tool
Background: Comparison of large protein datasets has become a standard task in bioinformatics. Typically researchers wish to know whether one group of proteins is significantly en...
Thorsten Schmidt, Dmitrij Frishman
IPPS
2007
IEEE
13 years 11 months ago
A Comparative Study of Parallel Metaheuristics for Protein Structure Prediction on the Computational Grid
A comparative study of parallel metaheuristics executed in grid environments is proposed, having as case study a genetic algorithm, a simulated annealing algorithm and a random se...
Alexandru-Adrian Tantar, Nouredine Melab, El-Ghaza...
BMCBI
2005
77views more  BMCBI 2005»
13 years 4 months ago
Structural comparison of metabolic networks in selected single cell organisms
Background: There has been tremendous interest in the study of biological network structure. An array of measurements has been conceived to assess the topological properties of th...
Dongxiao Zhu, Zhaohui S. Qin
BMCBI
2010
147views more  BMCBI 2010»
13 years 5 months ago
Learning biological network using mutual information and conditional independence
Background: Biological networks offer us a new way to investigate the interactions among different components and address the biological system as a whole. In this paper, a revers...
Dong-Chul Kim, Xiaoyu Wang, Chin-Rang Yang, Jean G...