56 search results - page 1 / 12 » RDP2: recombination detection and analysis from sequence ali... |
BIOINFORMATICS
2005
13 years 4 months ago
2005
GCB
2000
Springer
13 years 8 months ago
2000
Springer
Conventional phylogenetic tree estimation methods assume that all sites in a DNA multiple alignment have the same evolutionary history. This assumption is violated in data sets fro...
BMCBI
2006
2006
A jumping profile Hidden Markov Model and applications to recombination sites in HIV and HCV genomes
13 years 4 months ago
Background: Jumping alignments have recently been proposed as a strategy to search a given multiple sequence alignment A against a database. Instead of comparing a database sequen...
CSB
2004
IEEE
13 years 8 months ago
2004
IEEE
A new computational method to study within-host viral evolution is explored to better understand the evolution and pathogenesis of viruses. Traditional phylogenetic tree methods a...
JCB
2002
13 years 4 months ago
2002
We describe a new algorithm for protein classi cation and the detection of remote homologs. The rationale is to exploit both vertical and horizontal information of a multiple alig...