10 search results - page 1 / 2 » ReRep: Computational detection of repetitive sequences in ge... |
BMCBI
2008
13 years 4 months ago
2008
Background: Genome survey sequences (GSS) offer a preliminary global view of a genome since, unlike ESTs, they cover coding as well as non-coding DNA and include repetitive region...
BMCBI
2006
13 years 4 months ago
2006
Background: Genome sequences vary strongly in their repetitiveness and the causes for this are still debated. Here we propose a novel measure of genome repetitiveness, the index o...
TAMC
2009
Springer
13 years 11 months ago
2009
Springer
In this paper, we present a survey of the approximability and fixed-parameter tractability results for some Exemplar Genomic Distance problems. We mainly focus on three problems: ...
BIOCOMP
2006
13 years 6 months ago
2006
Currently, the genome sequencing community is producing shotgun sequence data at a very high rate, but genome finishing is not keeping pace, even with the help from several automa...
IPPS
2003
IEEE
13 years 9 months ago
2003
IEEE
We have developed a new algorithm that allows the exhaustive determination of words of up to 12 nucleotides in DNA sequences. It is fast enough as to be used at a genomic scale ru...