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BMCBI
2008
125views more  BMCBI 2008»
13 years 5 months ago
XplorSeq: A software environment for integrated management and phylogenetic analysis of metagenomic sequence data
Background: Advances in automated DNA sequencing technology have accelerated the generation of metagenomic DNA sequences, especially environmental ribosomal RNA gene (rDNA) sequen...
Daniel N. Frank
PPPJ
2009
ACM
14 years 4 days ago
Tracking performance across software revisions
Repository-based revision control systems such as CVS, RCS, Subversion, and GIT, are extremely useful tools that enable software developers to concurrently modify source code, man...
Nagy Mostafa, Chandra Krintz
COLING
2002
13 years 5 months ago
The LinGO Redwoods Treebank: Motivation and Preliminary Applications
The LinGO Redwoods initiative is a seed activity in the design and development of a new type of treebank. While several medium- to large-scale treebanks exist for English (and for...
Stephan Oepen, Kristina Toutanova, Stuart M. Shieb...
IJCNN
2000
IEEE
13 years 9 months ago
EM Algorithms for Self-Organizing Maps
eresting web-available abstracts and papers on clustering: An Analysis of Recent Work on Clustering Algorithms (1999), Daniel Fasulo : This paper describes four recent papers on cl...
Tom Heskes, Jan-Joost Spanjers, Wim Wiegerinck
BMCBI
2011
13 years 10 days ago
OrthoInspector: comprehensive orthology analysis and visual exploration
Background: The accurate determination of orthology and inparalogy relationships is essential for comparative sequence analysis, functional gene annotation and evolutionary studie...
Benjamin Linard, Julie D. Thompson, Olivier Poch, ...