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» Relating Accumulative and Non-accumulative Functional Progra...
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BMCBI
2006
150views more  BMCBI 2006»
13 years 5 months ago
CGAT: a comparative genome analysis tool for visualizing alignments in the analysis of complex evolutionary changes between clos
Background: The recent accumulation of closely related genomic sequences provides a valuable resource for the elucidation of the evolutionary histories of various organisms. Howev...
Ikuo Uchiyama, Toshio Higuchi, Ichizo Kobayashi
BMCBI
2006
107views more  BMCBI 2006»
13 years 5 months ago
Analysis of optimal phenotypic space using elementary modes as applied to Corynebacterium glutamicum
Background: Quantification of the metabolic network of an organism offers insights into possible ways of developing mutant strain for better productivity of an extracellular metab...
Kalyan Gayen, K. V. Venkatesh
BMCBI
2008
116views more  BMCBI 2008»
13 years 5 months ago
GBParsy: A GenBank flatfile parser library with high speed
Background: GenBank flatfile (GBF) format is one of the most popular sequence file formats because of its detailed sequence features and ease of readability. To use the data in th...
Tae-Ho Lee, Yeon-Ki Kim, Baek Hie Nahm
BMCBI
2004
200views more  BMCBI 2004»
13 years 5 months ago
ABC: software for interactive browsing of genomic multiple sequence alignment data
Background: Alignment and comparison of related genome sequences is a powerful method to identify regions likely to contain functional elements. Such analyses are data intensive, ...
Gregory M. Cooper, Senthil A. G. Singaravelu, Aren...