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» Rounding of Sequences and Matrices, with Applications
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BMCBI
2010
121views more  BMCBI 2010»
13 years 5 months ago
Knowledge-based annotation of small molecule binding sites in proteins
Background: The study of protein-small molecule interactions is vital for understanding protein function and for practical applications in drug discovery. To benefit from the rapi...
Ratna R. Thangudu, Manoj Tyagi, Benjamin A. Shoema...
IPL
2007
72views more  IPL 2007»
13 years 5 months ago
How to safely close a discussion
In the secure communication problem, we focus on safe termination. In applications such as electronic transactions, we want each party to be ensured that both sides agree on the s...
Gildas Avoine, Serge Vaudenay
ECEASST
2006
103views more  ECEASST 2006»
13 years 5 months ago
Petri Nets and Matrix Graph Grammars: Reachability
This paper contributes in two directions. First, several concepts of our matrix approach to graph transformation [1,2] such as coherence and minimal initial digraph are applied to ...
Juan de Lara, Pedro Pablo Pérez Velasco
ISMIR
2004
Springer
124views Music» more  ISMIR 2004»
13 years 11 months ago
A Comparison of Rhythmic Similarity Measures
Measuring the similarity between rhythms is a fundamental problem in computational music theory, with many applications such as music information retrieval and copyright infringem...
Godfried T. Toussaint
RECOMB
1999
Springer
13 years 9 months ago
Fast detection of common geometric substructure in proteins
We consider the problem of identifying common three-dimensional substructures between proteins. Our method is based on comparing the shape of the α-carbon backbone structures of ...
L. Paul Chew, Daniel P. Huttenlocher, Klara Kedem,...