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» Rounding of Sequences and Matrices, with Applications
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BMCBI
2007
115views more  BMCBI 2007»
13 years 6 months ago
Comparing sequences without using alignments: application to HIV/SIV subtyping
Background: In general, the construction of trees is based on sequence alignments. This procedure, however, leads to loss of informationwhen parts of sequence alignments (for inst...
Gilles Didier, Laurent Debomy, Maude Pupin, Ming Z...
CORR
2006
Springer
90views Education» more  CORR 2006»
13 years 6 months ago
Symmetric Subresultants and Applications
Schur's transforms of a polynomial are used to count its roots in the unit disk. These are generalized them by introducing the sequence of symmetric sub-resultants of two pol...
Cyril Brunie, Philippe Saux Picart
BIBM
2010
IEEE
156views Bioinformatics» more  BIBM 2010»
13 years 4 months ago
Truncation of protein sequences for fast profile alignment with application to subcellular localization
We have recently found that the computation time of homology-based subcellular localization can be substantially reduced by aligning profiles up to the cleavage site positions of s...
Man-Wai Mak, Wei Wang, Sun-Yuan Kung
AISADM
2005
Springer
13 years 11 months ago
A Cooperative Multi-agent Data Mining Model and Its Application to Medical Data on Diabetes
Abstract. We present CoLe, a model for cooperative agents for mining knowledge from heterogeneous data. CoLe allows for the cooperation of different mining agents and the combinat...
Jie Gao, Jörg Denzinger, Robert C. James
ICCNMC
2005
Springer
13 years 11 months ago
Improved Thumbprint and Its Application for Intrusion Detection
This paper proposes RTT-thumbprint to traceback intruders, and to detect stepping-stone intrusion; RTT-thumbprint is a sequence of timestamp pairs of a send packet and its correspo...
Jianhua Yang, Shou-Hsuan Stephen Huang