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» Runway sequencing with holding patterns
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BMCBI
2008
108views more  BMCBI 2008»
13 years 5 months ago
Empirical methods for controlling false positives and estimating confidence in ChIP-Seq peaks
Background: High throughput signature sequencing holds many promises, one of which is the ready identification of in vivo transcription factor binding sites, histone modifications...
David A. Nix, Samir J. Courdy, Kenneth M. Boucher
BMCBI
2008
132views more  BMCBI 2008»
13 years 5 months ago
The Average Mutual Information Profile as a Genomic Signature
Background: Occult organizational structures in DNA sequences may hold the key to understanding functional and evolutionary aspects of the DNA molecule. Such structures can also p...
Mark Bauer, Sheldon M. Schuster, Khalid Sayood
BIBM
2007
IEEE
133views Bioinformatics» more  BIBM 2007»
13 years 5 months ago
Mining Clinical Data with a Temporal Dimension: A Case Study
Clinical databases store large amounts of information about patients and their medical conditions. Data mining techniques can extract relationships and patterns holding in this we...
Michele Berlingerio, Francesco Bonchi, Fosca Giann...
SLSFS
2005
Springer
13 years 11 months ago
Incorporating Constraints and Prior Knowledge into Factorization Algorithms - An Application to 3D Recovery
Abstract. Matrix factorization is a fundamental building block in many computer vision and machine learning algorithms. In this work we focus on the problem of ”structure from mo...
Amit Gruber, Yair Weiss
BALT
2006
13 years 9 months ago
Introducing Softness into Inductive Queries on String Databases
In many application domains (e.g., WWW mining, molecular biology), large string datasets are available and yet under-exploited. The inductive database framework assumes that both s...
Ieva Mitasiunaite, Jean-François Boulicaut