15 search results - page 1 / 3 » SHAPE directed RNA folding |
BMCBI
2004
13 years 4 months ago
2004
Background: An increasing number of researchers have released novel RNA structure analysis and prediction algorithms for comparative approaches to structure prediction. Yet, indep...
IPMI
2009
Springer
14 years 5 months ago
2009
Springer
Abstract. The exterior surface of the brain is characterized by a juxtaposition of crests and troughs that together form a folding pattern. The majority of the deformations that oc...
DNA
2009
Springer
13 years 11 months ago
2009
Springer
Knowledge of energy barriers between pairs of secondary structures for a given DNA or RNA molecule is useful, both in understanding RNA function in biological settings and in desig...
BMCBI
2008
13 years 5 months ago
2008
Background: Most non-coding RNA families exert their function by means of a conserved, common secondary structure. The Rfam data base contains more than five hundred structurally ...
BMCBI
2010
13 years 5 months ago
2010
Background: A widely used method to find conserved secondary structure in RNA is to first construct a multiple sequence alignment, and then fold the alignment, optimizing a score ...