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JCC
2006
103views more  JCC 2006»
13 years 5 months ago
Flooding in GROMACS: Accelerated barrier crossings in molecular dynamics
: The major bottleneck of today's atomistic molecular dynamics (MD) simulations is that because of the enormous computational effort involved, only processes at nanoseconds to...
Oliver F. Lange, Lars V. Schäfer, Helmut Grub...
AIMSA
2006
Springer
13 years 9 months ago
A Knowledge-Based Approach for Automatic Generation of Summaries of Behavior
Effective automatic summarization usually requires simulating asoning such as abstraction or relevance reasoning. In this paper we describe a solution for this type of reasoning in...
Martín Molina, Victor Flores
CVPR
2011
IEEE
13 years 1 months ago
Simulating Human Saccadic Scanpaths on Natural Images
Human saccade is a dynamic process of information pursuit. Based on the principle of information maximization, we propose a computational model to simulate human saccadic scanpath...
Wei Wang, Cheng Chen, Yizhou Wang, Tingting Jiang,...
ALMOB
2007
170views more  ALMOB 2007»
13 years 5 months ago
A spatio-temporal mining approach towards summarizing and analyzing protein folding trajectories
Understanding the protein folding mechanism remains a grand challenge in structural biology. In the past several years, computational theories in molecular dynamics have been empl...
Hui Yang, Srinivasan Parthasarathy, Duygu Ucar
IPPS
2007
IEEE
13 years 12 months ago
Modeling of NAMD's Network Input/Output on Large PC Clusters
This study examined the interplay among processor speed, cluster interconnect and file I/O, using parallel applications to quantify interactions. We focused on a common case wher...
Nancy Tran, Daniel A. Reed