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» Scaling Clustering Algorithms to Large Databases
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BMCBI
2010
136views more  BMCBI 2010»
13 years 5 months ago
SCPS: a fast implementation of a spectral method for detecting protein families on a genome-wide scale
Background: An important problem in genomics is the automatic inference of groups of homologous proteins from pairwise sequence similarities. Several approaches have been proposed...
Tamás Nepusz, Rajkumar Sasidharan, Alberto ...
AAAI
2008
13 years 8 months ago
Visualization of Large-Scale Weighted Clustered Graph: A Genetic Approach
In this paper, a bottom-up hierarchical genetic algorithm is proposed to visualize clustered data into a planar graph. To achieve global optimization by accelerating local optimiz...
Jiayu Zhou, Youfang Lin, Xi Wang
DBISP2P
2008
Springer
124views Database» more  DBISP2P 2008»
13 years 7 months ago
Exploiting Distribution Skew for Scalable P2P Text Clustering
K-Means clustering is widely used in information retrieval and data mining. Distributed K-Means variants have already been proposed, but none of the past algorithms scales to large...
Odysseas Papapetrou, Wolf Siberski, Fabian Leitrit...
GCB
1997
Springer
77views Biometrics» more  GCB 1997»
13 years 9 months ago
Statistics of large scale sequence searching
Motivation: Database search programs such as FASTA, BLAST or a rigorous Smith–Waterman algorithm produce lists of database entries, which are assumed to be related to the query....
Rainer Spang, Martin Vingron
KDD
2012
ACM
271views Data Mining» more  KDD 2012»
11 years 8 months ago
GigaTensor: scaling tensor analysis up by 100 times - algorithms and discoveries
Many data are modeled as tensors, or multi dimensional arrays. Examples include the predicates (subject, verb, object) in knowledge bases, hyperlinks and anchor texts in the Web g...
U. Kang, Evangelos E. Papalexakis, Abhay Harpale, ...