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» Seeding Genetic Programming Populations
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BMCBI
2010
164views more  BMCBI 2010»
13 years 6 months ago
Pan-genome sequence analysis using Panseq: an online tool for the rapid analysis of core and accessory genomic regions
Background: The pan-genome of a bacterial species consists of a core and an accessory gene pool. The accessory genome is thought to be an important source of genetic variability i...
Chad Laing, Cody Buchanan, Eduardo N. Taboada, Yon...
RECOMB
2002
Springer
14 years 6 months ago
Comparison of minisatellites
In the class of repeated sequences that occur in DNA, minisatellites have been found polymorphic and became useful tools in genetic mapping and forensic studies. They consist of a...
Eric Rivals, Sèverine Bérard
CPM
2009
Springer
122views Combinatorics» more  CPM 2009»
14 years 17 days ago
Haplotype Inference Constrained by Plausible Haplotype Data
The haplotype inference problem (HIP) asks to find a set of haplotypes which resolve a given set of genotypes. This problem is of enormous importance in many practical fields, su...
Michael R. Fellows, Tzvika Hartman, Danny Hermelin...
GECCO
2005
Springer
140views Optimization» more  GECCO 2005»
13 years 11 months ago
CGP visits the Santa Fe trail: effects of heuristics on GP
GP uses trees to represent chromosomes. The user defines the representation space by defining the set of functions and terminals to label the nodes in the trees, and GP searches t...
Cezary Z. Janikow, Christopher J. Mann
BMCBI
2005
103views more  BMCBI 2005»
13 years 5 months ago
SeqDoC: rapid SNP and mutation detection by direct comparison of DNA sequence chromatograms
Background: This paper describes SeqDoC, a simple, web-based tool to carry out direct comparison of ABI sequence chromatograms. This allows the rapid identification of single nucl...
Mark L. Crowe