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» Sequence Complexity for Biological Sequence Analysis
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BIBE
2005
IEEE
121views Bioinformatics» more  BIBE 2005»
13 years 11 months ago
RNA Pseudoknot Prediction Using Term Rewriting
RNA plays a critical role in mediating every step of cellular information transfer from genes to functional proteins. Pseudoknots are widely occurring structural motifs found in a...
Xuezheng Fu, Hao Wang, William L. Harrison, Robert...
MM
2005
ACM
140views Multimedia» more  MM 2005»
13 years 11 months ago
Topic transition detection using hierarchical hidden Markov and semi-Markov models
In this paper we introduce a probabilistic framework to exploit hierarchy, structure sharing and duration information for topic transition detection in videos. Our probabilistic d...
Dinh Q. Phung, Thi V. Duong, Svetha Venkatesh, Hun...
SIGECOM
2010
ACM
173views ECommerce» more  SIGECOM 2010»
13 years 6 months ago
Approximating pure nash equilibrium in cut, party affiliation, and satisfiability games
Cut games and party affiliation games are well-known classes of potential games. Schaffer and Yannakakis showed that computing pure Nash equilibrium in these games is PLScomplete....
Anand Bhalgat, Tanmoy Chakraborty, Sanjeev Khanna
BMCBI
2010
96views more  BMCBI 2010»
13 years 6 months ago
QTLminer: identifying genes regulating quantitative traits
Background: Quantitative trait locus (QTL) mapping identifies genomic regions that likely contain genes regulating a quantitative trait. However, QTL regions may encompass tens to...
Rudi Alberts, Klaus Schughart
BMCBI
2007
131views more  BMCBI 2007»
13 years 6 months ago
An improved method for identifying functionally linked proteins using phylogenetic profiles
Background: Phylogenetic profiles record the occurrence of homologs of genes across fully sequenced organisms. Proteins with similar profiles are typically components of protein c...
Shawn Cokus, Sayaka Mizutani, Matteo Pellegrini